Biomedical Data Science Facility
The Innovation Centre Biomedical Data Science Facility provides support for researchers from the generation, interpretation, and analysis of biological data sets through to the development of automated analysis pipelines.
Biology and medical sciences are progressively becoming data intensive through the complexity and size of data sets from both genomic analysis and high throughput instrumentation like those found within the Innovation Centre. These now require the development of automated pipelines and software, to extract the data researchers require to solve complex biological problems.
![Biomedical Data Science Facility Team Biomedical Data Science Facility Team](https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Team.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=68&q=60&w=120 120w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Team.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=135&q=60&w=240 240w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Team.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=203&q=60&w=360 360w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Team.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=270&q=60&w=480 480w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Team.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=338&q=60&w=600 600w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Team.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=405&q=60&w=720 720w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Team.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=473&q=60&w=840 840w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Team.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=540&q=60&w=960 960w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Team.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=608&q=60&w=1080 1080w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Team.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=675&q=60&w=1200 1200w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Team.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=743&q=60&w=1320 1320w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Team.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=810&q=60&w=1440 1440w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Team.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=878&q=60&w=1560 1560w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Team.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=945&q=60&w=1680 1680w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Team.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=1013&q=60&w=1800 1800w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Team.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=1080&q=60&w=1920 1920w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Team.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=1114&q=60&w=1980 1980w)
Biomedical Data Science Facility Team
Biomedical Data Science Facility Services
- Development of software, scripts, and visualization tools to automate analysis of multi-omics, high-throughput and bioimaging data
- Development of image analysis software to extract quantitative data from bioimages
- Scientific and high-performance (HPC) computing software development
- Genomic analysis
- Bulk (mi)RNA-Seq (differential expression, functional enrichments)
- DNA-Seq (whole exome, whole genome)
- Chip-Seq (peak calling, motif enrichment)
- Single Cell RNA-Seq (cell type clustering, pseudotime analysis, differential expression, functional enrichment)
- Customised hands-on training on all developed software
- Fee for service
![Biomedical Data Science Facility Data Tools Biomedical Data Science Facility Data Tools](https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Instruments.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=68&q=60&w=120 120w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Instruments.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=135&q=60&w=240 240w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Instruments.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=203&q=60&w=360 360w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Instruments.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=270&q=60&w=480 480w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Instruments.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=338&q=60&w=600 600w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Instruments.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=405&q=60&w=720 720w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Instruments.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=473&q=60&w=840 840w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Instruments.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=540&q=60&w=960 960w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Instruments.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=608&q=60&w=1080 1080w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Instruments.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=675&q=60&w=1200 1200w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Instruments.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=743&q=60&w=1320 1320w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Instruments.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=810&q=60&w=1440 1440w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Instruments.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=878&q=60&w=1560 1560w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Instruments.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=945&q=60&w=1680 1680w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Instruments.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=1013&q=60&w=1800 1800w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Instruments.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=1080&q=60&w=1920 1920w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Instruments.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=1114&q=60&w=1980 1980w)
![Biomedical Data Science Facility Data Analysis Session Biomedical Data Science Facility Data Analysis Session](https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Data-Analysis.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=68&q=60&w=120 120w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Data-Analysis.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=135&q=60&w=240 240w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Data-Analysis.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=203&q=60&w=360 360w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Data-Analysis.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=270&q=60&w=480 480w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Data-Analysis.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=338&q=60&w=600 600w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Data-Analysis.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=405&q=60&w=720 720w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Data-Analysis.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=473&q=60&w=840 840w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Data-Analysis.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=540&q=60&w=960 960w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Data-Analysis.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=608&q=60&w=1080 1080w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Data-Analysis.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=675&q=60&w=1200 1200w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Data-Analysis.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=743&q=60&w=1320 1320w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Data-Analysis.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=810&q=60&w=1440 1440w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Data-Analysis.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=878&q=60&w=1560 1560w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Data-Analysis.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=945&q=60&w=1680 1680w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Data-Analysis.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=1013&q=60&w=1800 1800w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Data-Analysis.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=1080&q=60&w=1920 1920w, https://victorchang-cdn.imgix.net/assets/src/uploads/Biomedical-Data-Science-Facility-Data-Analysis.jpg?auto=compress%2Cformat&crop=focalpoint&fit=crop&fp-x=0.5&fp-y=0.5&h=1114&q=60&w=1980 1980w)
Enquiries
Dr David Humphreys
Senior Research Scientist, Biomedical Data Sciences Facility
d.humphreys@victorchang.edu.au
Dr Satya Arjunan
Scientific Software Engineer, Biomedical Data Sciences Facility
s.arjunan@victorchang.edu.au
Paul Young
Senior Research Officer, Biomedical Data Sciences Facility
p.young@victorchang.edu.au
Jess Farr
Scientific Software Engineer, Biomedical Data Sciences Facility
j.farr@victorchang.edu.au
Acknowledgement of Country
The Victor Chang Cardiac Research Institute acknowledges Traditional Owners of Country throughout Australia and recognises the continuing connection to lands, waters and communities. We pay our respect to Aboriginal and Torres Strait Islander cultures; and to Elders past and present.